Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC124067.4-201ENST00000519691 2379 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AC133963.1-201ENST00000504166 1679 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 SLC25A1P2-201ENST00000430693 912 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AC009065.1-201ENST00000564055 1225 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AC092338.2-201ENST00000568827 1415 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AC010240.3-201ENST00000607688 395 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 OR6D1P-202ENST00000641007 5290 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 NKILA-202ENST00000614771 2598 ntBASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS1Q8NFJ9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
BBS1Q8NFJ9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 AC011676.5-201ENST00000624864 2660 ntBASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 TSPY17P-201ENST00000450329 467 ntBASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 AP003071.4-201ENST00000562276 1284 ntBASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.14■□□□□ 0.17
BBS1Q8NFJ9 AL138688.1-201ENST00000624851 1594 ntBASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 AL390955.1-201ENST00000428694 934 ntBASIC16.13■□□□□ 0.17
BBS1Q8NFJ9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms