Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF444P1-201ENST00000559497 298 ntBASIC16.82■□□□□ 0.28
NUP43Q8NFH3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.82■□□□□ 0.28
NUP43Q8NFH3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 AC004263.2-201ENST00000617183 678 ntBASIC16.81■□□□□ 0.28
NUP43Q8NFH3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUP43Q8NFH3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 HBZP1-201ENST00000354915 429 ntBASIC16.8■□□□□ 0.28
NUP43Q8NFH3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 RCN1P1-201ENST00000400413 996 ntBASIC16.8■□□□□ 0.28
NUP43Q8NFH3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 KRT18P65-201ENST00000439811 1286 ntBASIC16.8■□□□□ 0.28
NUP43Q8NFH3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 AP003733.1-201ENST00000491725 852 ntBASIC16.8■□□□□ 0.28
NUP43Q8NFH3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 RN7SL850P-201ENST00000579959 291 ntBASIC16.8■□□□□ 0.28
NUP43Q8NFH3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUP43Q8NFH3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 MIR662-201ENST00000384847 95 ntBASIC16.79■□□□□ 0.28
NUP43Q8NFH3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms