Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 AC068472.1-201ENST00000474589 881 ntBASIC16.65■□□□□ 0.26
BEST3Q8N1M1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST3Q8N1M1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
BEST3Q8N1M1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.64■□□□□ 0.26
BEST3Q8N1M1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
BEST3Q8N1M1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
BEST3Q8N1M1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.64■□□□□ 0.26
BEST3Q8N1M1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 AC126763.1-201ENST00000552015 2118 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 KRT8P10-201ENST00000450021 1447 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 AC079781.3-201ENST00000449110 356 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 KRT16P4-201ENST00000453883 522 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 AC096582.2-201ENST00000510860 516 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 BNIP3P18-201ENST00000593976 575 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 AC009154.2-201ENST00000621177 724 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 FZD10-202ENST00000539839 3282 ntBASIC16.64■□□□□ 0.25
BEST3Q8N1M1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST3Q8N1M1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.63■□□□□ 0.25
BEST3Q8N1M1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST3Q8N1M1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms