Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AC091607.1-201ENST00000490318 1060 ntBASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AC112698.1-201ENST00000510299 916 ntBASIC17.19■□□□□ 0.34
RNF44Q7L0R7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AP000867.3-201ENST00000524675 377 ntBASIC17.19■□□□□ 0.34
RNF44Q7L0R7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AC012615.1-201ENST00000565797 1299 ntBASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AP005901.3-202ENST00000581653 237 ntBASIC17.19■□□□□ 0.34
RNF44Q7L0R7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF44Q7L0R7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 KRT17P6-201ENST00000453795 1220 ntBASIC17.18■□□□□ 0.34
RNF44Q7L0R7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF44Q7L0R7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms