Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN4Q6PJG9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN4Q6PJG9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN4Q6PJG9 AC008894.3-201ENST00000624324 3103 ntBASIC16.19■□□□□ 0.18
LRFN4Q6PJG9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.19■□□□□ 0.18
LRFN4Q6PJG9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.19■□□□□ 0.18
LRFN4Q6PJG9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 AL024508.2-201ENST00000607749 1894 ntBASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 KRT18P57-201ENST00000443599 1254 ntBASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 AC141586.5-201ENST00000624546 2050 ntBASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN4Q6PJG9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 AL096828.2-201ENST00000567259 1965 ntBASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 AC117947.1-201ENST00000427448 529 ntBASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 YBX1P2-201ENST00000489612 999 ntBASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 AC138028.4-201ENST00000564984 1845 ntBASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN4Q6PJG9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 AC008764.6-201ENST00000595909 2069 ntBASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms