Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 AC108073.2-201ENST00000464002 357 ntBASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 CYMP-203ENST00000474680 1263 ntBASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 C20orf181-201ENST00000623918 480 ntBASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD4Q5XG99 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 AC006504.4-201ENST00000592118 1568 ntBASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD4Q5XG99 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 ESPNP-201ENST00000270691 2015 ntBASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 COX5BP2-201ENST00000392354 334 ntBASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 VN2R19P-201ENST00000442399 1052 ntBASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 RFPL4AP1-201ENST00000530883 850 ntBASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 AC092865.6-201ENST00000642101 219 ntBASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD4Q5XG99 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms