Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 AC241585.1-201ENST00000433527 519 ntBASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 RBPMS2P1-201ENST00000437762 623 ntBASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 SPTLC1P1-201ENST00000447199 261 ntBASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 AC092919.2-201ENST00000623631 1645 ntBASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 KRT8P50-201ENST00000562022 1438 ntBASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 AC008677.1-201ENST00000519230 1561 ntBASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 AC006128.1-201ENST00000624704 1661 ntBASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 AC002056.1-201ENST00000395613 760 ntBASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 GPR182-203ENST00000622922 591 ntBASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 AD001527.2-201ENST00000622994 785 ntBASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPF38BQ5VTL8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 GGTLC5P-201ENST00000617623 998 ntBASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPF38BQ5VTL8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 AL671277.1-201ENST00000429656 993 ntBASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 INE1-201ENST00000456273 945 ntBASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.28■□□□□ 0.68
PRPF38BQ5VTL8 MIR4538-201ENST00000581377 78 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms