Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 AP000867.4-201ENST00000641616 219 ntBASIC18.95■□□□□ 0.62
VARS2Q5ST30 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 MTATP6P19-201ENST00000413797 659 ntBASIC18.94■□□□□ 0.62
VARS2Q5ST30 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 SLC25A1P1-201ENST00000528351 927 ntBASIC18.94■□□□□ 0.62
VARS2Q5ST30 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 AF228730.7-201ENST00000641842 219 ntBASIC18.94■□□□□ 0.62
VARS2Q5ST30 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 AC135776.1-201ENST00000319817 2481 ntBASIC18.94■□□□□ 0.62
VARS2Q5ST30 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
VARS2Q5ST30 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARS2Q5ST30 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 AC092183.1-201ENST00000469884 875 ntBASIC18.93■□□□□ 0.62
VARS2Q5ST30 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.93■□□□□ 0.62
VARS2Q5ST30 AL139288.1-201ENST00000623748 933 ntBASIC18.93■□□□□ 0.62
VARS2Q5ST30 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARS2Q5ST30 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.93■□□□□ 0.62
VARS2Q5ST30 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 RPS2P1-201ENST00000434010 821 ntBASIC18.92■□□□□ 0.62
VARS2Q5ST30 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 AC122714.2-201ENST00000502787 707 ntBASIC18.92■□□□□ 0.62
VARS2Q5ST30 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 AC139887.3-201ENST00000568585 713 ntBASIC18.92■□□□□ 0.62
VARS2Q5ST30 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
VARS2Q5ST30 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms