Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 KRT8P26-201ENST00000534154 1276 ntBASIC18.65■□□□□ 0.58
RAB6CQ53S08 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB6CQ53S08 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB6CQ53S08 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB6CQ53S08 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB6CQ53S08 PP12613-201ENST00000424958 2230 ntBASIC18.64■□□□□ 0.57
RAB6CQ53S08 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 AP005901.3-202ENST00000581653 237 ntBASIC18.63■□□□□ 0.57
RAB6CQ53S08 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 AP000550.4-202ENST00000639755 178 ntBASIC18.63■□□□□ 0.57
RAB6CQ53S08 AL355312.1-201ENST00000407115 2176 ntBASIC18.63■□□□□ 0.57
RAB6CQ53S08 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB6CQ53S08 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB6CQ53S08 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB6CQ53S08 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
RAB6CQ53S08 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB6CQ53S08 AC005336.2-201ENST00000593183 939 ntBASIC18.62■□□□□ 0.57
RAB6CQ53S08 IGHV3-41-201ENST00000613121 348 ntBASIC18.62■□□□□ 0.57
RAB6CQ53S08 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB6CQ53S08 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RAB6CQ53S08 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 GNAS-203ENST00000306120 1878 ntBASIC18.62■□□□□ 0.57
RAB6CQ53S08 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms