Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC004967.1-201ENST00000453589 447 ntBASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 AC108751.1-201ENST00000490852 363 ntBASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 PGM5P2-202ENST00000637225 1043 ntBASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 AC134684.3-201ENST00000641758 218 ntBASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 AL353593.2-201ENST00000602529 1483 ntBASIC19.48■□□□□ 0.71
TRIM71Q2Q1W2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 MIR3687-2-201ENST00000577708 61 ntBASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 MIR3687-1-201ENST00000614492 61 ntBASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 AL589182.2-201ENST00000619332 1049 ntBASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 AC004706.3-202ENST00000621574 984 ntBASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM71Q2Q1W2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AL049757.1-201ENST00000616842 1596 ntBASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 AC132938.5-201ENST00000624980 1813 ntBASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM71Q2Q1W2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 SIRPAP1-201ENST00000448467 1770 ntBASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM71Q2Q1W2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms