Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS3AP61247 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS3AP61247 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
RPS3AP61247 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 MIR4674-201ENST00000582457 87 ntBASIC16.85■□□□□ 0.29
RPS3AP61247 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
RPS3AP61247 CR769767.2-201ENST00000622735 460 ntBASIC16.85■□□□□ 0.29
RPS3AP61247 AL590326.2-201ENST00000625139 305 ntBASIC16.85■□□□□ 0.29
RPS3AP61247 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RPS3AP61247 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPS3AP61247 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RPS3AP61247 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 RCC2P3-201ENST00000418112 1537 ntBASIC16.85■□□□□ 0.29
RPS3AP61247 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPS3AP61247 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS3AP61247 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS3AP61247 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 AC135776.1-201ENST00000319817 2481 ntBASIC16.84■□□□□ 0.29
RPS3AP61247 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.84■□□□□ 0.29
RPS3AP61247 AC009947.2-201ENST00000444014 672 ntBASIC16.84■□□□□ 0.29
RPS3AP61247 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.84■□□□□ 0.29
RPS3AP61247 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.84■□□□□ 0.29
RPS3AP61247 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.84■□□□□ 0.29
RPS3AP61247 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RPS3AP61247 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 AL109659.2-201ENST00000606809 1674 ntBASIC16.84■□□□□ 0.29
RPS3AP61247 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS3AP61247 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS3AP61247 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS3AP61247 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.29
RPS3AP61247 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPS3AP61247 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPS3AP61247 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RPS3AP61247 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS3AP61247 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RPS3AP61247 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS3AP61247 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS3AP61247 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms