Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN2P57739 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN2P57739 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.67■□□□□ 0.42
CLDN2P57739 SCARNA2-201ENST00000458748 420 ntBASIC17.67■□□□□ 0.42
CLDN2P57739 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN2P57739 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN2P57739 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN2P57739 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 MIR7706-201ENST00000613747 67 ntBASIC17.67■□□□□ 0.42
CLDN2P57739 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN2P57739 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN2P57739 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN2P57739 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN2P57739 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN2P57739 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN2P57739 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN2P57739 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CLDN2P57739 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN2P57739 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN2P57739 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 AC021087.4-201ENST00000563761 564 ntBASIC17.66■□□□□ 0.42
CLDN2P57739 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN2P57739 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN2P57739 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN2P57739 AL671883.3-201ENST00000603274 991 ntBASIC17.66■□□□□ 0.42
CLDN2P57739 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN2P57739 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN2P57739 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN2P57739 FAM215A-202ENST00000632077 792 ntBASIC17.66■□□□□ 0.42
CLDN2P57739 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN2P57739 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN2P57739 AL096828.2-201ENST00000567259 1965 ntBASIC17.66■□□□□ 0.42
CLDN2P57739 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 AC010460.3-201ENST00000511359 1579 ntBASIC17.66■□□□□ 0.42
CLDN2P57739 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN2P57739 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 FAM220CP-201ENST00000395253 831 ntBASIC17.65■□□□□ 0.42
CLDN2P57739 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 AC093909.1-201ENST00000504731 1122 ntBASIC17.65■□□□□ 0.42
CLDN2P57739 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN2P57739 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN2P57739 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLDN2P57739 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN2P57739 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN2P57739 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN2P57739 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.64■□□□□ 0.42
CLDN2P57739 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN2P57739 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CLDN2P57739 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN2P57739 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN2P57739 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLDN2P57739 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN2P57739 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 RPS2P1-201ENST00000434010 821 ntBASIC17.64■□□□□ 0.41
CLDN2P57739 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms