Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CLDN12P56749 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 AC036111.1-201ENST00000533973 1582 ntBASIC15.63■□□□□ 0.09
CLDN12P56749 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN12P56749 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.63■□□□□ 0.09
CLDN12P56749 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN12P56749 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN12P56749 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CLDN12P56749 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN12P56749 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
CLDN12P56749 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN12P56749 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN12P56749 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN12P56749 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN12P56749 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN12P56749 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 RN7SL471P-201ENST00000580476 299 ntBASIC15.62■□□□□ 0.09
CLDN12P56749 MIR3180-5-201ENST00000583743 153 ntBASIC15.62■□□□□ 0.09
CLDN12P56749 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
CLDN12P56749 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 AL118508.1-201ENST00000613502 2345 ntBASIC15.62■□□□□ 0.09
CLDN12P56749 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CLDN12P56749 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN12P56749 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN12P56749 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN12P56749 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN12P56749 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CLDN12P56749 AP000692.2-201ENST00000608391 879 ntBASIC15.61■□□□□ 0.09
CLDN12P56749 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 AL138688.1-201ENST00000624851 1594 ntBASIC15.61■□□□□ 0.09
CLDN12P56749 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN12P56749 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN12P56749 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN12P56749 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN12P56749 AC133963.1-201ENST00000504166 1679 ntBASIC15.6■□□□□ 0.09
CLDN12P56749 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN12P56749 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN12P56749 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN12P56749 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN12P56749 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN12P56749 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN12P56749 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN12P56749 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN12P56749 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms