Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 AC104819.1-201ENST00000504587 486 ntBASIC19.76■□□□□ 0.75
PEX3P56589 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.76■□□□□ 0.75
PEX3P56589 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 IGHV3-47-201ENST00000425060 335 ntBASIC19.75■□□□□ 0.75
PEX3P56589 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 NSUN5P1-202ENST00000421140 1535 ntBASIC19.75■□□□□ 0.75
PEX3P56589 NSUN5P2-203ENST00000457352 1529 ntBASIC19.75■□□□□ 0.75
PEX3P56589 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PEX3P56589 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PEX3P56589 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 CLEC4GP1-201ENST00000596555 870 ntBASIC19.74■□□□□ 0.75
PEX3P56589 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 AC012313.10-201ENST00000623509 926 ntBASIC19.74■□□□□ 0.75
PEX3P56589 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PEX3P56589 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PEX3P56589 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 MINOS1P3-201ENST00000457048 203 ntBASIC19.73■□□□□ 0.75
PEX3P56589 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.73■□□□□ 0.75
PEX3P56589 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.73■□□□□ 0.75
PEX3P56589 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms