Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 AC104819.1-201ENST00000504587 486 ntBASIC19.76■□□□□ 0.75
PEX3P56589 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.76■□□□□ 0.75
PEX3P56589 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PEX3P56589 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
PEX3P56589 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEX3P56589 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.76■□□□□ 0.75
PEX3P56589 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 IGHV3-47-201ENST00000425060 335 ntBASIC19.75■□□□□ 0.75
PEX3P56589 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.75■□□□□ 0.75
PEX3P56589 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.75■□□□□ 0.75
PEX3P56589 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 NSUN5P1-202ENST00000421140 1535 ntBASIC19.75■□□□□ 0.75
PEX3P56589 NSUN5P2-203ENST00000457352 1529 ntBASIC19.75■□□□□ 0.75
PEX3P56589 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PEX3P56589 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEX3P56589 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.75■□□□□ 0.75
PEX3P56589 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PEX3P56589 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 CLEC4GP1-201ENST00000596555 870 ntBASIC19.74■□□□□ 0.75
PEX3P56589 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 AC012313.10-201ENST00000623509 926 ntBASIC19.74■□□□□ 0.75
PEX3P56589 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.74■□□□□ 0.75
PEX3P56589 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PEX3P56589 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PEX3P56589 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PEX3P56589 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PEX3P56589 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 MINOS1P3-201ENST00000457048 203 ntBASIC19.73■□□□□ 0.75
PEX3P56589 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.73■□□□□ 0.75
PEX3P56589 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.73■□□□□ 0.75
PEX3P56589 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms