Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.04■□□□□ 0.32
NR1H2P55055 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NR1H2P55055 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 AC026271.3-201ENST00000571884 352 ntBASIC17.04■□□□□ 0.32
NR1H2P55055 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.04■□□□□ 0.32
NR1H2P55055 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.04■□□□□ 0.32
NR1H2P55055 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
NR1H2P55055 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NR1H2P55055 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NR1H2P55055 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NR1H2P55055 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 TFP1-202ENST00000475455 1573 ntBASIC17.03■□□□□ 0.32
NR1H2P55055 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H2P55055 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H2P55055 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.03■□□□□ 0.32
NR1H2P55055 TUBB8P6-201ENST00000436895 1288 ntBASIC17.03■□□□□ 0.32
NR1H2P55055 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 AC116562.2-201ENST00000507042 360 ntBASIC17.03■□□□□ 0.32
NR1H2P55055 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NR1H2P55055 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.03■□□□□ 0.32
NR1H2P55055 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H2P55055 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.03■□□□□ 0.32
NR1H2P55055 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H2P55055 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H2P55055 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.02■□□□□ 0.32
NR1H2P55055 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.02■□□□□ 0.32
NR1H2P55055 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NR1H2P55055 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NR1H2P55055 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.02■□□□□ 0.32
NR1H2P55055 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.02■□□□□ 0.32
NR1H2P55055 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NR1H2P55055 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.02■□□□□ 0.32
NR1H2P55055 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.02■□□□□ 0.32
NR1H2P55055 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.02■□□□□ 0.32
NR1H2P55055 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.02■□□□□ 0.32
NR1H2P55055 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.02■□□□□ 0.32
NR1H2P55055 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NR1H2P55055 AL445675.2-201ENST00000620291 557 ntBASIC17.02■□□□□ 0.32
NR1H2P55055 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.02■□□□□ 0.32
NR1H2P55055 MYC-208ENST00000641036 567 ntBASIC17.02■□□□□ 0.32
NR1H2P55055 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NR1H2P55055 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H2P55055 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
NR1H2P55055 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H2P55055 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NR1H2P55055 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.02■□□□□ 0.31
NR1H2P55055 DOC2GP-204ENST00000639052 2548 ntBASIC17.02■□□□□ 0.31
NR1H2P55055 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.02■□□□□ 0.31
NR1H2P55055 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H2P55055 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
NR1H2P55055 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H2P55055 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms