Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATRXP46100 MIR943-201ENST00000401286 94 ntBASIC16.28■□□□□ 0.2
ATRXP46100 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATRXP46100 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 IGHV3-72-202ENST00000621503 303 ntBASIC16.28■□□□□ 0.2
ATRXP46100 PGM5P2-202ENST00000637225 1043 ntBASIC16.28■□□□□ 0.2
ATRXP46100 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATRXP46100 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATRXP46100 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATRXP46100 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.28■□□□□ 0.2
ATRXP46100 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATRXP46100 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.28■□□□□ 0.2
ATRXP46100 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.27■□□□□ 0.2
ATRXP46100 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.27■□□□□ 0.2
ATRXP46100 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.27■□□□□ 0.2
ATRXP46100 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATRXP46100 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.27■□□□□ 0.2
ATRXP46100 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.27■□□□□ 0.2
ATRXP46100 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.27■□□□□ 0.2
ATRXP46100 PRYP5-201ENST00000451909 266 ntBASIC16.27■□□□□ 0.2
ATRXP46100 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.27■□□□□ 0.2
ATRXP46100 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.27■□□□□ 0.2
ATRXP46100 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.27■□□□□ 0.2
ATRXP46100 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.27■□□□□ 0.2
ATRXP46100 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATRXP46100 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.27■□□□□ 0.2
ATRXP46100 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATRXP46100 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ATRXP46100 AC012676.1-201ENST00000574705 1949 ntBASIC16.27■□□□□ 0.19
ATRXP46100 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATRXP46100 AC079776.1-201ENST00000401540 1152 ntBASIC16.27■□□□□ 0.19
ATRXP46100 IGLL3P-201ENST00000412472 434 ntBASIC16.27■□□□□ 0.19
ATRXP46100 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.27■□□□□ 0.19
ATRXP46100 FAM58CP-201ENST00000435741 640 ntBASIC16.27■□□□□ 0.19
ATRXP46100 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATRXP46100 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATRXP46100 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATRXP46100 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ATRXP46100 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATRXP46100 SDHAP2-201ENST00000455183 2001 ntBASIC16.27■□□□□ 0.19
ATRXP46100 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATRXP46100 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.27■□□□□ 0.19
ATRXP46100 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATRXP46100 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
ATRXP46100 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ATRXP46100 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.26■□□□□ 0.19
ATRXP46100 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 AL162274.1-201ENST00000617191 1098 ntBASIC16.26■□□□□ 0.19
ATRXP46100 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.26■□□□□ 0.19
ATRXP46100 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.26■□□□□ 0.19
ATRXP46100 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.26■□□□□ 0.19
ATRXP46100 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.26■□□□□ 0.19
ATRXP46100 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.26■□□□□ 0.19
ATRXP46100 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.26■□□□□ 0.19
ATRXP46100 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.26■□□□□ 0.19
ATRXP46100 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.26■□□□□ 0.19
ATRXP46100 AC010507.1-201ENST00000633895 436 ntBASIC16.26■□□□□ 0.19
ATRXP46100 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.26■□□□□ 0.19
ATRXP46100 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATRXP46100 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATRXP46100 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.26■□□□□ 0.19
ATRXP46100 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.25■□□□□ 0.19
ATRXP46100 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATRXP46100 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATRXP46100 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.25■□□□□ 0.19
ATRXP46100 SERBP1P5-201ENST00000510079 1181 ntBASIC16.25■□□□□ 0.19
ATRXP46100 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.25■□□□□ 0.19
ATRXP46100 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.25■□□□□ 0.19
ATRXP46100 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.25■□□□□ 0.19
ATRXP46100 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.25■□□□□ 0.19
ATRXP46100 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.25■□□□□ 0.19
ATRXP46100 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATRXP46100 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATRXP46100 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms