Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 PP12613-201ENST00000424958 2230 ntBASIC18.8■□□□□ 0.6
SLC1A1P43005 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SLC1A1P43005 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLC1A1P43005 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC1A1P43005 AC087499.1-201ENST00000418141 1075 ntBASIC18.79■□□□□ 0.6
SLC1A1P43005 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 AC093827.2-201ENST00000512654 315 ntBASIC18.79■□□□□ 0.6
SLC1A1P43005 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC1A1P43005 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC1A1P43005 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC1A1P43005 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC1A1P43005 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC1A1P43005 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A1P43005 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC1A1P43005 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 AC141586.5-201ENST00000624546 2050 ntBASIC18.78■□□□□ 0.6
SLC1A1P43005 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A1P43005 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLC1A1P43005 LINC00304-203ENST00000565008 1864 ntBASIC18.78■□□□□ 0.6
SLC1A1P43005 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC1A1P43005 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC1A1P43005 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 DDX43P3-201ENST00000441064 443 ntBASIC18.78■□□□□ 0.6
SLC1A1P43005 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A1P43005 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC1A1P43005 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC1A1P43005 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC1A1P43005 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC1A1P43005 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 AL391807.1-203ENST00000604392 2365 ntBASIC18.78■□□□□ 0.6
SLC1A1P43005 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A1P43005 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A1P43005 AL023806.1-201ENST00000603994 1649 ntBASIC18.78■□□□□ 0.6
SLC1A1P43005 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A1P43005 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A1P43005 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.77■□□□□ 0.6
SLC1A1P43005 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A1P43005 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A1P43005 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A1P43005 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A1P43005 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A1P43005 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A1P43005 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC1A1P43005 AL136038.4-201ENST00000603606 1261 ntBASIC18.77■□□□□ 0.6
SLC1A1P43005 LINC01451-201ENST00000623792 534 ntBASIC18.77■□□□□ 0.6
SLC1A1P43005 AL023973.1-201ENST00000624619 620 ntBASIC18.77■□□□□ 0.6
SLC1A1P43005 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A1P43005 HLA-J-201ENST00000462773 1622 ntBASIC18.77■□□□□ 0.6
SLC1A1P43005 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A1P43005 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A1P43005 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A1P43005 AC108860.2-201ENST00000562760 2183 ntBASIC18.76■□□□□ 0.59
SLC1A1P43005 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A1P43005 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A1P43005 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A1P43005 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SLC1A1P43005 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A1P43005 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 LIN28AP1-201ENST00000429574 405 ntBASIC18.76■□□□□ 0.59
SLC1A1P43005 COX11P1-201ENST00000489116 835 ntBASIC18.76■□□□□ 0.59
SLC1A1P43005 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms