Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC099343.3-201ENST00000605834 2503 ntBASIC18.94■□□□□ 0.62
CHRNA3P32297 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA3P32297 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA3P32297 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 AL031133.1-201ENST00000406807 723 ntBASIC18.93■□□□□ 0.62
CHRNA3P32297 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.93■□□□□ 0.62
CHRNA3P32297 KRT18P38-201ENST00000449496 1282 ntBASIC18.93■□□□□ 0.62
CHRNA3P32297 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA3P32297 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.93■□□□□ 0.62
CHRNA3P32297 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA3P32297 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA3P32297 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA3P32297 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA3P32297 AC108860.2-201ENST00000562760 2183 ntBASIC18.92■□□□□ 0.62
CHRNA3P32297 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA3P32297 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA3P32297 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA3P32297 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CHRNA3P32297 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA3P32297 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA3P32297 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA3P32297 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.92■□□□□ 0.62
CHRNA3P32297 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.92■□□□□ 0.62
CHRNA3P32297 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHRNA3P32297 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CHRNA3P32297 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA3P32297 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CHRNA3P32297 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.91■□□□□ 0.62
CHRNA3P32297 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 STARP1-201ENST00000397973 869 ntBASIC18.91■□□□□ 0.62
CHRNA3P32297 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.91■□□□□ 0.62
CHRNA3P32297 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.91■□□□□ 0.62
CHRNA3P32297 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.91■□□□□ 0.62
CHRNA3P32297 AC024243.1-201ENST00000609234 778 ntBASIC18.91■□□□□ 0.62
CHRNA3P32297 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA3P32297 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CHRNA3P32297 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA3P32297 HOXB1-202ENST00000577092 1414 ntBASIC18.91■□□□□ 0.62
CHRNA3P32297 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHRNA3P32297 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA3P32297 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 PP12613-201ENST00000424958 2230 ntBASIC18.9■□□□□ 0.62
CHRNA3P32297 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA3P32297 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA3P32297 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms