Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD11P31277 C11orf96-202ENST00000528572 1834 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HOXD11P31277 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 ECEL1P1-201ENST00000373592 1742 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXD11P31277 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXD11P31277 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 AC243591.1-201ENST00000452967 1364 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 AL049697.3-201ENST00000406493 982 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 TMA16P2-201ENST00000413187 601 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 DNAJA1P1-201ENST00000425106 1187 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXD11P31277 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXD11P31277 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXD11P31277 MTND2P4-201ENST00000445034 1004 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 AC009502.2-201ENST00000452903 766 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 AC112482.1-201ENST00000492080 688 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 IGHV3-22-201ENST00000520721 359 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXD11P31277 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXD11P31277 AC095055.1-201ENST00000603472 1113 ntBASIC19.22■□□□□ 0.67
HOXD11P31277 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXD11P31277 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXD11P31277 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXD11P31277 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXD11P31277 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXD11P31277 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXD11P31277 AL512635.1-201ENST00000414056 832 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 METTL21AP1-201ENST00000438852 635 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXD11P31277 AP000542.1-201ENST00000448473 371 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXD11P31277 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXD11P31277 AC008628.1-201ENST00000508663 265 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 AC011726.1-201ENST00000515686 669 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXD11P31277 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXD11P31277 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXD11P31277 AC011477.4-201ENST00000590274 609 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXD11P31277 AC005252.1-201ENST00000604518 1063 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXD11P31277 AL157770.1-201ENST00000623049 439 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXD11P31277 AC099654.8-201ENST00000637757 681 ntBASIC19.21■□□□□ 0.67
HOXD11P31277 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXD11P31277 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXD11P31277 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXD11P31277 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXD11P31277 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXD11P31277 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXD11P31277 AC003102.1-202ENST00000563394 1796 ntBASIC19.2■□□□□ 0.66
HOXD11P31277 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXD11P31277 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXD11P31277 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXD11P31277 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXD11P31277 RPL17P35-201ENST00000432217 549 ntBASIC19.2■□□□□ 0.66
HOXD11P31277 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXD11P31277 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXD11P31277 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXD11P31277 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXD11P31277 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXD11P31277 MTCYBP20-201ENST00000524239 1129 ntBASIC19.2■□□□□ 0.66
HOXD11P31277 OR7E13P-201ENST00000526052 910 ntBASIC19.2■□□□□ 0.66
HOXD11P31277 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXD11P31277 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXD11P31277 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXD11P31277 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXD11P31277 AC005229.3-201ENST00000603438 323 ntBASIC19.2■□□□□ 0.66
HOXD11P31277 AL136038.4-201ENST00000603606 1261 ntBASIC19.2■□□□□ 0.66
HOXD11P31277 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms