Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC080080.1-201ENST00000625121 2420 ntBASIC20.06■□□□□ 0.8
CASP1P29466 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.06■□□□□ 0.8
CASP1P29466 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.06■□□□□ 0.8
CASP1P29466 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CASP1P29466 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.06■□□□□ 0.8
CASP1P29466 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 VENTXP5-201ENST00000523979 775 ntBASIC20.06■□□□□ 0.8
CASP1P29466 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.06■□□□□ 0.8
CASP1P29466 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.06■□□□□ 0.8
CASP1P29466 LINC01023-201ENST00000606054 436 ntBASIC20.06■□□□□ 0.8
CASP1P29466 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
CASP1P29466 HYMAI.1-201ENST00000620949 238 ntBASIC20.06■□□□□ 0.8
CASP1P29466 AL031432.5-201ENST00000641059 760 ntBASIC20.06■□□□□ 0.8
CASP1P29466 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CASP1P29466 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
CASP1P29466 KRT8P47-201ENST00000604727 1398 ntBASIC20.06■□□□□ 0.8
CASP1P29466 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP1P29466 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CASP1P29466 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.06■□□□□ 0.8
CASP1P29466 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.05■□□□□ 0.8
CASP1P29466 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CASP1P29466 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP1P29466 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP1P29466 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP1P29466 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CASP1P29466 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 RCN1P1-201ENST00000400413 996 ntBASIC20.05■□□□□ 0.8
CASP1P29466 AK4P3-201ENST00000418260 669 ntBASIC20.05■□□□□ 0.8
CASP1P29466 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.05■□□□□ 0.8
CASP1P29466 RN7SL850P-201ENST00000579959 291 ntBASIC20.05■□□□□ 0.8
CASP1P29466 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
CASP1P29466 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP1P29466 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP1P29466 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CASP1P29466 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CASP1P29466 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.04■□□□□ 0.8
CASP1P29466 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP1P29466 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP1P29466 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CASP1P29466 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP1P29466 SPDYE13P-201ENST00000445314 798 ntBASIC20.04■□□□□ 0.8
CASP1P29466 AC112907.2-201ENST00000448639 330 ntBASIC20.04■□□□□ 0.8
CASP1P29466 AC113404.2-201ENST00000507884 177 ntBASIC20.04■□□□□ 0.8
CASP1P29466 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.04■□□□□ 0.8
CASP1P29466 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.04■□□□□ 0.8
CASP1P29466 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CASP1P29466 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CASP1P29466 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP1P29466 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CASP1P29466 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP1P29466 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 HBZP1-201ENST00000354915 429 ntBASIC20.03■□□□□ 0.8
CASP1P29466 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.03■□□□□ 0.8
CASP1P29466 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP1P29466 RNF152P1-201ENST00000397754 604 ntBASIC20.03■□□□□ 0.8
CASP1P29466 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP1P29466 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP1P29466 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CASP1P29466 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP1P29466 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP1P29466 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.03■□□□□ 0.8
CASP1P29466 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms