Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.63■□□□□ 0.89
CAPN2P17655 AC004832.2-201ENST00000426397 482 ntBASIC20.63■□□□□ 0.89
CAPN2P17655 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.63■□□□□ 0.89
CAPN2P17655 AC112482.1-201ENST00000492080 688 ntBASIC20.63■□□□□ 0.89
CAPN2P17655 AC096582.2-201ENST00000510860 516 ntBASIC20.63■□□□□ 0.89
CAPN2P17655 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.63■□□□□ 0.89
CAPN2P17655 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.63■□□□□ 0.89
CAPN2P17655 MTDHP3-201ENST00000594186 672 ntBASIC20.63■□□□□ 0.89
CAPN2P17655 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.62■□□□□ 0.89
CAPN2P17655 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN2P17655 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CAPN2P17655 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN2P17655 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN2P17655 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.62■□□□□ 0.89
CAPN2P17655 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN2P17655 HTR5BP-201ENST00000430851 1154 ntBASIC20.62■□□□□ 0.89
CAPN2P17655 KRT18P3-201ENST00000451602 1288 ntBASIC20.62■□□□□ 0.89
CAPN2P17655 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.62■□□□□ 0.89
CAPN2P17655 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.62■□□□□ 0.89
CAPN2P17655 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CAPN2P17655 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CAPN2P17655 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CAPN2P17655 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN2P17655 AC104109.2-201ENST00000602919 1418 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 AC104581.1-202ENST00000635932 2618 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 AL512353.2-201ENST00000448759 1962 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 HLA-J-201ENST00000462773 1622 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 HNRNPDP1-201ENST00000439535 754 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CAPN2P17655 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.61■□□□□ 0.89
CAPN2P17655 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.61■□□□□ 0.89
CAPN2P17655 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN2P17655 AC009533.2-201ENST00000543664 586 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN2P17655 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.61■□□□□ 0.89
CAPN2P17655 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN2P17655 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 RCC2P3-201ENST00000418112 1537 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.61■□□□□ 0.89
CAPN2P17655 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN2P17655 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN2P17655 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 AIRN-201ENST00000601203 4374 ntBASIC20.61■□□□□ 0.89
CAPN2P17655 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CAPN2P17655 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN2P17655 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN2P17655 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CAPN2P17655 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CAPN2P17655 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN2P17655 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.6■□□□□ 0.89
CAPN2P17655 AC034105.1-201ENST00000563488 319 ntBASIC20.6■□□□□ 0.89
CAPN2P17655 AC010327.4-202ENST00000591484 748 ntBASIC20.6■□□□□ 0.89
CAPN2P17655 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN2P17655 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.6■□□□□ 0.89
CAPN2P17655 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN2P17655 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms