Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 LINC00304-203ENST00000565008 1864 ntBASIC15.25■□□□□ 0.03
HIST1H1DP16402 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H1DP16402 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H1DP16402 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 AC011676.5-201ENST00000624864 2660 ntBASIC15.24■□□□□ 0.03
HIST1H1DP16402 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 AC022898.2-201ENST00000616822 1312 ntBASIC15.24■□□□□ 0.03
HIST1H1DP16402 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.24■□□□□ 0.03
HIST1H1DP16402 AL359736.2-201ENST00000621992 437 ntBASIC15.24■□□□□ 0.03
HIST1H1DP16402 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1DP16402 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1DP16402 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 AP003041.3-201ENST00000527151 707 ntBASIC15.23■□□□□ 0.03
HIST1H1DP16402 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 AP005242.2-201ENST00000580065 1175 ntBASIC15.23■□□□□ 0.03
HIST1H1DP16402 AL023803.3-201ENST00000615559 522 ntBASIC15.23■□□□□ 0.03
HIST1H1DP16402 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1DP16402 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1DP16402 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms