Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
CFTRP13569 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC30.48■■■□□ 2.47
CFTRP13569 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
CFTRP13569 DAD1-205ENST00000543337 501 ntTSL 3 BASIC30.48■■■□□ 2.47
CFTRP13569 IGHV3OR16-6-201ENST00000568775 360 ntBASIC30.48■■■□□ 2.47
CFTRP13569 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC30.48■■■□□ 2.47
CFTRP13569 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC30.48■■■□□ 2.47
CFTRP13569 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
CFTRP13569 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC30.48■■■□□ 2.47
CFTRP13569 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
CFTRP13569 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC30.48■■■□□ 2.47
CFTRP13569 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CFTRP13569 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC30.47■■■□□ 2.47
CFTRP13569 AC092919.2-201ENST00000623631 1645 ntBASIC30.47■■■□□ 2.47
CFTRP13569 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC30.47■■■□□ 2.47
CFTRP13569 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
CFTRP13569 MED16-214ENST00000617672 554 ntTSL 5 BASIC30.47■■■□□ 2.47
CFTRP13569 LINC00628-201ENST00000628516 1289 ntBASIC30.47■■■□□ 2.47
CFTRP13569 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC30.47■■■□□ 2.47
CFTRP13569 AC007064.4-201ENST00000637740 555 ntBASIC30.47■■■□□ 2.47
CFTRP13569 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
CFTRP13569 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CFTRP13569 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
CFTRP13569 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC30.46■■■□□ 2.47
CFTRP13569 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
CFTRP13569 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 AC092474.2-201ENST00000424288 719 ntBASIC30.46■■■□□ 2.47
CFTRP13569 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC30.46■■■□□ 2.47
CFTRP13569 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC30.46■■■□□ 2.47
CFTRP13569 AC004449.1-201ENST00000564240 433 ntBASIC30.46■■■□□ 2.47
CFTRP13569 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC30.46■■■□□ 2.47
CFTRP13569 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC30.46■■■□□ 2.47
CFTRP13569 AF228730.6-201ENST00000641497 218 ntBASIC30.46■■■□□ 2.47
CFTRP13569 AC084121.3-201ENST00000641716 218 ntBASIC30.46■■■□□ 2.47
CFTRP13569 AC105233.6-201ENST00000642093 218 ntBASIC30.46■■■□□ 2.47
CFTRP13569 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC30.46■■■□□ 2.47
CFTRP13569 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC30.46■■■□□ 2.47
CFTRP13569 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CFTRP13569 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CFTRP13569 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CFTRP13569 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CFTRP13569 AC025678.2-201ENST00000562061 970 ntBASIC30.45■■■□□ 2.47
CFTRP13569 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CFTRP13569 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
CFTRP13569 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC30.45■■■□□ 2.46
CFTRP13569 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC30.45■■■□□ 2.46
CFTRP13569 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC30.45■■■□□ 2.46
CFTRP13569 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CFTRP13569 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 AL627223.1-201ENST00000416693 442 ntBASIC30.44■■■□□ 2.46
CFTRP13569 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 PUDP-206ENST00000540122 825 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC30.44■■■□□ 2.46
CFTRP13569 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
CFTRP13569 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 AC006116.8-202ENST00000587620 1550 ntBASIC30.44■■■□□ 2.46
CFTRP13569 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 NEK7-201ENST00000367383 586 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC30.44■■■□□ 2.46
CFTRP13569 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 RBM7-207ENST00000544582 692 ntTSL 3 BASIC30.44■■■□□ 2.46
CFTRP13569 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC30.44■■■□□ 2.46
CFTRP13569 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC30.44■■■□□ 2.46
CFTRP13569 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC30.44■■■□□ 2.46
CFTRP13569 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFTRP13569 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CFTRP13569 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC30.44■■■□□ 2.46
CFTRP13569 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CFTRP13569 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
CFTRP13569 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms