Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.23□□□□□ -0.13
PF4V1P10720 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.23□□□□□ -0.13
PF4V1P10720 RNF126P1-202ENST00000569893 925 ntBASIC14.23□□□□□ -0.13
PF4V1P10720 AC005332.3-201ENST00000589904 676 ntBASIC14.23□□□□□ -0.13
PF4V1P10720 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PF4V1P10720 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PF4V1P10720 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 AC104581.1-202ENST00000635932 2618 ntBASIC14.23□□□□□ -0.13
PF4V1P10720 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PF4V1P10720 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.22□□□□□ -0.13
PF4V1P10720 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 DRAXINP1-201ENST00000437611 948 ntBASIC14.22□□□□□ -0.13
PF4V1P10720 FAAHP1-202ENST00000446499 1238 ntBASIC14.22□□□□□ -0.13
PF4V1P10720 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 AC012615.1-201ENST00000565797 1299 ntBASIC14.22□□□□□ -0.13
PF4V1P10720 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.22□□□□□ -0.13
PF4V1P10720 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PF4V1P10720 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.22□□□□□ -0.13
PF4V1P10720 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.22□□□□□ -0.13
PF4V1P10720 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 GPR32P1-201ENST00000601788 811 ntBASIC14.22□□□□□ -0.13
PF4V1P10720 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.22□□□□□ -0.13
PF4V1P10720 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
PF4V1P10720 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PF4V1P10720 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.22□□□□□ -0.13
PF4V1P10720 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PF4V1P10720 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.22□□□□□ -0.13
PF4V1P10720 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.21□□□□□ -0.13
PF4V1P10720 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.21□□□□□ -0.13
PF4V1P10720 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PF4V1P10720 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.21□□□□□ -0.13
PF4V1P10720 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PF4V1P10720 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PF4V1P10720 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.21□□□□□ -0.13
PF4V1P10720 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.21□□□□□ -0.13
PF4V1P10720 GUSBP12-201ENST00000513727 720 ntBASIC14.21□□□□□ -0.13
PF4V1P10720 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.21□□□□□ -0.13
PF4V1P10720 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.21□□□□□ -0.13
PF4V1P10720 AC091304.2-201ENST00000564639 760 ntBASIC14.21□□□□□ -0.13
PF4V1P10720 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.21□□□□□ -0.13
PF4V1P10720 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 Z69720.1-201ENST00000601483 472 ntBASIC14.21□□□□□ -0.13
PF4V1P10720 IFNL4P1-201ENST00000607083 540 ntBASIC14.21□□□□□ -0.13
PF4V1P10720 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.21□□□□□ -0.13
PF4V1P10720 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 LINC01126-201ENST00000623515 1646 ntBASIC14.21□□□□□ -0.13
PF4V1P10720 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms