Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC1P07992 STARP1-201ENST00000397973 869 ntBASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ERCC1P07992 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC1P07992 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC1P07992 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.94■□□□□ 0.14
ERCC1P07992 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ERCC1P07992 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC1P07992 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ERCC1P07992 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC1P07992 AC012313.1-201ENST00000593393 3059 ntBASIC15.93■□□□□ 0.14
ERCC1P07992 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ERCC1P07992 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 AC036111.1-201ENST00000533973 1582 ntBASIC15.93■□□□□ 0.14
ERCC1P07992 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ERCC1P07992 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.93■□□□□ 0.14
ERCC1P07992 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.93■□□□□ 0.14
ERCC1P07992 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.93■□□□□ 0.14
ERCC1P07992 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ERCC1P07992 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.93■□□□□ 0.14
ERCC1P07992 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 AC134043.2-201ENST00000624206 2238 ntBASIC15.93■□□□□ 0.14
ERCC1P07992 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
ERCC1P07992 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ERCC1P07992 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.93■□□□□ 0.14
ERCC1P07992 GCSHP2-201ENST00000560971 527 ntBASIC15.93■□□□□ 0.14
ERCC1P07992 MIR4674-201ENST00000582457 87 ntBASIC15.93■□□□□ 0.14
ERCC1P07992 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.93■□□□□ 0.14
ERCC1P07992 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ERCC1P07992 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ERCC1P07992 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC1P07992 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC1P07992 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC1P07992 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.92■□□□□ 0.14
ERCC1P07992 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
ERCC1P07992 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC1P07992 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 MIR564-202ENST00000385049 94 ntBASIC15.92■□□□□ 0.14
ERCC1P07992 AL031133.1-201ENST00000406807 723 ntBASIC15.92■□□□□ 0.14
ERCC1P07992 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.92■□□□□ 0.14
ERCC1P07992 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.92■□□□□ 0.14
ERCC1P07992 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.92■□□□□ 0.14
ERCC1P07992 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.92■□□□□ 0.14
ERCC1P07992 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
ERCC1P07992 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.92■□□□□ 0.14
ERCC1P07992 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC1P07992 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 AP000550.4-202ENST00000639755 178 ntBASIC15.92■□□□□ 0.14
ERCC1P07992 AC034236.2-201ENST00000606662 1610 ntBASIC15.92■□□□□ 0.14
ERCC1P07992 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms