Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.78■□□□□ 0.28
PDGFAP04085 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFAP04085 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PDGFAP04085 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDGFAP04085 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDGFAP04085 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PDGFAP04085 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDGFAP04085 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.77■□□□□ 0.28
PDGFAP04085 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.77■□□□□ 0.28
PDGFAP04085 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.77■□□□□ 0.28
PDGFAP04085 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDGFAP04085 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDGFAP04085 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFAP04085 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFAP04085 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFAP04085 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFAP04085 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.77■□□□□ 0.27
PDGFAP04085 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PDGFAP04085 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFAP04085 AC141586.3-201ENST00000562166 1838 ntBASIC16.76■□□□□ 0.27
PDGFAP04085 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFAP04085 RCN1P2-201ENST00000398357 915 ntBASIC16.76■□□□□ 0.27
PDGFAP04085 MIR940-201ENST00000401276 94 ntBASIC16.76■□□□□ 0.27
PDGFAP04085 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PDGFAP04085 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFAP04085 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 RNPS1P1-201ENST00000507437 918 ntBASIC16.76■□□□□ 0.27
PDGFAP04085 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
PDGFAP04085 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.76■□□□□ 0.27
PDGFAP04085 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.76■□□□□ 0.27
PDGFAP04085 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.76■□□□□ 0.27
PDGFAP04085 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PDGFAP04085 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDGFAP04085 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFAP04085 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDGFAP04085 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 AC099343.3-201ENST00000605834 2503 ntBASIC16.75■□□□□ 0.27
PDGFAP04085 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDGFAP04085 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDGFAP04085 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PDGFAP04085 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDGFAP04085 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 MIR1233-2-201ENST00000408138 82 ntBASIC16.75■□□□□ 0.27
PDGFAP04085 MIR1233-1-201ENST00000408722 82 ntBASIC16.75■□□□□ 0.27
PDGFAP04085 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.75■□□□□ 0.27
PDGFAP04085 HNRNPDP1-201ENST00000439535 754 ntBASIC16.75■□□□□ 0.27
PDGFAP04085 RPL13AP23-201ENST00000480739 586 ntBASIC16.75■□□□□ 0.27
PDGFAP04085 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms