Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 SPDYE21P-201ENST00000413323 827 ntBASIC21.49■■□□□ 1.03
COL1A1P02452 UPF3AP3-201ENST00000420996 769 ntBASIC21.49■■□□□ 1.03
COL1A1P02452 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.49■■□□□ 1.03
COL1A1P02452 AL356488.2-201ENST00000602755 427 ntBASIC21.49■■□□□ 1.03
COL1A1P02452 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL1A1P02452 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 AC004817.3-201ENST00000602957 2129 ntBASIC21.49■■□□□ 1.03
COL1A1P02452 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
COL1A1P02452 AP000997.3-201ENST00000623333 2250 ntBASIC21.49■■□□□ 1.03
COL1A1P02452 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 AC090164.3-201ENST00000610780 2143 ntBASIC21.48■■□□□ 1.03
COL1A1P02452 AL353593.2-201ENST00000602529 1483 ntBASIC21.48■■□□□ 1.03
COL1A1P02452 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL1A1P02452 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A1P02452 GPX1P2-201ENST00000429271 606 ntBASIC21.48■■□□□ 1.03
COL1A1P02452 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.48■■□□□ 1.03
COL1A1P02452 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.48■■□□□ 1.03
COL1A1P02452 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.48■■□□□ 1.03
COL1A1P02452 AC107918.4-202ENST00000641623 219 ntBASIC21.48■■□□□ 1.03
COL1A1P02452 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A1P02452 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A1P02452 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A1P02452 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.48■■□□□ 1.03
COL1A1P02452 AP002414.3-201ENST00000589352 1468 ntBASIC21.47■■□□□ 1.03
COL1A1P02452 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
COL1A1P02452 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A1P02452 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A1P02452 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.47■■□□□ 1.03
COL1A1P02452 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.47■■□□□ 1.03
COL1A1P02452 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.47■■□□□ 1.03
COL1A1P02452 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.47■■□□□ 1.03
COL1A1P02452 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.47■■□□□ 1.03
COL1A1P02452 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A1P02452 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.47■■□□□ 1.03
COL1A1P02452 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A1P02452 SIGLEC16-201ENST00000599858 1437 ntBASIC21.47■■□□□ 1.03
COL1A1P02452 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A1P02452 AC132938.5-201ENST00000624980 1813 ntBASIC21.47■■□□□ 1.03
COL1A1P02452 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.47■■□□□ 1.03
COL1A1P02452 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A1P02452 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
COL1A1P02452 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.47■■□□□ 1.03
COL1A1P02452 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
COL1A1P02452 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
COL1A1P02452 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.46■■□□□ 1.03
COL1A1P02452 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.46■■□□□ 1.03
COL1A1P02452 AC040169.1-201ENST00000565382 521 ntBASIC21.46■■□□□ 1.03
COL1A1P02452 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
COL1A1P02452 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.46■■□□□ 1.03
COL1A1P02452 AC010327.4-202ENST00000591484 748 ntBASIC21.46■■□□□ 1.03
COL1A1P02452 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.46■■□□□ 1.03
COL1A1P02452 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COL1A1P02452 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A1P02452 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A1P02452 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
COL1A1P02452 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL1A1P02452 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.45■■□□□ 1.03
COL1A1P02452 COX5BP2-201ENST00000392354 334 ntBASIC21.45■■□□□ 1.03
COL1A1P02452 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
COL1A1P02452 RPSAP43-201ENST00000402237 625 ntBASIC21.45■■□□□ 1.03
COL1A1P02452 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COL1A1P02452 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.03
COL1A1P02452 AC092910.1-201ENST00000482027 1129 ntBASIC21.45■■□□□ 1.03
COL1A1P02452 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COL1A1P02452 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.45■■□□□ 1.03
COL1A1P02452 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COL1A1P02452 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL1A1P02452 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL1A1P02452 AL049757.1-201ENST00000616842 1596 ntBASIC21.45■■□□□ 1.03
COL1A1P02452 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
COL1A1P02452 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL1A1P02452 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL1A1P02452 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.45■■□□□ 1.02
COL1A1P02452 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms