Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AC068472.1-201ENST00000474589 881 ntBASIC13.87□□□□□ -0.19
TRBV12-3P01733 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 GUSBP12-201ENST00000513727 720 ntBASIC13.87□□□□□ -0.19
TRBV12-3P01733 DUTP2-201ENST00000519164 463 ntBASIC13.87□□□□□ -0.19
TRBV12-3P01733 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 KRT18P1-202ENST00000452408 1331 ntBASIC13.87□□□□□ -0.19
TRBV12-3P01733 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV12-3P01733 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRBV12-3P01733 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AL845331.1-201ENST00000424978 1190 ntBASIC13.86□□□□□ -0.19
TRBV12-3P01733 MTCL1P1-201ENST00000446207 792 ntBASIC13.86□□□□□ -0.19
TRBV12-3P01733 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 RN7SL606P-201ENST00000472779 293 ntBASIC13.86□□□□□ -0.19
TRBV12-3P01733 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AC090616.6-201ENST00000582640 721 ntBASIC13.86□□□□□ -0.19
TRBV12-3P01733 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AP002414.4-201ENST00000589764 1148 ntBASIC13.86□□□□□ -0.19
TRBV12-3P01733 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AC092119.3-201ENST00000612618 583 ntBASIC13.86□□□□□ -0.19
TRBV12-3P01733 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TRBV12-3P01733 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms