Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.23□□□□□ -0.13
IFNA1P01562 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 KRT18P41-201ENST00000518924 1277 ntBASIC14.23□□□□□ -0.13
IFNA1P01562 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.23□□□□□ -0.13
IFNA1P01562 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 OR10C1-204ENST00000622521 1039 ntBASIC14.23□□□□□ -0.13
IFNA1P01562 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 AC105020.1-201ENST00000435356 2205 ntBASIC14.23□□□□□ -0.13
IFNA1P01562 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
IFNA1P01562 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 PCDHA14-201ENST00000506751 2298 ntBASIC14.22□□□□□ -0.13
IFNA1P01562 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.22□□□□□ -0.13
IFNA1P01562 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
IFNA1P01562 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
IFNA1P01562 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.22□□□□□ -0.13
IFNA1P01562 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
IFNA1P01562 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.22□□□□□ -0.13
IFNA1P01562 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.22□□□□□ -0.13
IFNA1P01562 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
IFNA1P01562 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IFNA1P01562 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFNA1P01562 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
IFNA1P01562 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 PCDH8P1-201ENST00000428983 2773 ntBASIC14.21□□□□□ -0.13
IFNA1P01562 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms