Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SORBS3O60504 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SORBS3O60504 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SORBS3O60504 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.17■□□□□ 0.82
SORBS3O60504 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SORBS3O60504 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.16■□□□□ 0.82
SORBS3O60504 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
SORBS3O60504 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.16■□□□□ 0.82
SORBS3O60504 FGFR3P6-201ENST00000457012 610 ntBASIC20.16■□□□□ 0.82
SORBS3O60504 RNA5SP419-201ENST00000515908 135 ntBASIC20.16■□□□□ 0.82
SORBS3O60504 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.16■□□□□ 0.82
SORBS3O60504 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.16■□□□□ 0.82
SORBS3O60504 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.16■□□□□ 0.82
SORBS3O60504 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.16■□□□□ 0.82
SORBS3O60504 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.16■□□□□ 0.82
SORBS3O60504 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.16■□□□□ 0.82
SORBS3O60504 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SORBS3O60504 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SORBS3O60504 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.15■□□□□ 0.82
SORBS3O60504 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.15■□□□□ 0.82
SORBS3O60504 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SORBS3O60504 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.15■□□□□ 0.82
SORBS3O60504 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 SLC25A1P1-201ENST00000528351 927 ntBASIC20.15■□□□□ 0.82
SORBS3O60504 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SORBS3O60504 AP001005.1-201ENST00000571755 1248 ntBASIC20.15■□□□□ 0.82
SORBS3O60504 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.15■□□□□ 0.82
SORBS3O60504 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.15■□□□□ 0.82
SORBS3O60504 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.15■□□□□ 0.82
SORBS3O60504 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 AL773604.1-201ENST00000617417 272 ntBASIC20.15■□□□□ 0.82
SORBS3O60504 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.15■□□□□ 0.82
SORBS3O60504 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SORBS3O60504 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.15■□□□□ 0.82
SORBS3O60504 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SORBS3O60504 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SORBS3O60504 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SORBS3O60504 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SORBS3O60504 AC135776.1-201ENST00000319817 2481 ntBASIC20.14■□□□□ 0.82
SORBS3O60504 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
SORBS3O60504 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.14■□□□□ 0.81
SORBS3O60504 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 AC073592.3-201ENST00000625118 1834 ntBASIC20.14■□□□□ 0.81
SORBS3O60504 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.14■□□□□ 0.81
SORBS3O60504 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.14■□□□□ 0.81
SORBS3O60504 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.14■□□□□ 0.81
SORBS3O60504 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.14■□□□□ 0.81
SORBS3O60504 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.14■□□□□ 0.81
SORBS3O60504 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.14■□□□□ 0.81
SORBS3O60504 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SORBS3O60504 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.14■□□□□ 0.81
SORBS3O60504 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SORBS3O60504 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.14■□□□□ 0.81
SORBS3O60504 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms