Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 AC097374.2-201ENST00000618617 1306 ntBASIC18.1■□□□□ 0.49
SMAD6O43541 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 AC004870.1-201ENST00000315132 882 ntBASIC18.1■□□□□ 0.49
SMAD6O43541 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.1■□□□□ 0.49
SMAD6O43541 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SMAD6O43541 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
SMAD6O43541 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 AC007967.3-201ENST00000434308 558 ntBASIC18.1■□□□□ 0.49
SMAD6O43541 AC132008.2-207ENST00000454517 770 ntBASIC18.1■□□□□ 0.49
SMAD6O43541 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 LINC01711-201ENST00000598340 967 ntBASIC18.1■□□□□ 0.49
SMAD6O43541 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD6O43541 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SMAD6O43541 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD6O43541 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.1■□□□□ 0.49
SMAD6O43541 AL354751.1-201ENST00000412768 1863 ntBASIC18.09■□□□□ 0.49
SMAD6O43541 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.09■□□□□ 0.49
SMAD6O43541 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.09■□□□□ 0.49
SMAD6O43541 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.09■□□□□ 0.49
SMAD6O43541 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.09■□□□□ 0.49
SMAD6O43541 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.09■□□□□ 0.49
SMAD6O43541 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.09■□□□□ 0.49
SMAD6O43541 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SMAD6O43541 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.09■□□□□ 0.49
SMAD6O43541 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SMAD6O43541 AC096633.1-201ENST00000422446 749 ntBASIC18.09■□□□□ 0.49
SMAD6O43541 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.09■□□□□ 0.49
SMAD6O43541 AC079781.3-201ENST00000449110 356 ntBASIC18.09■□□□□ 0.49
SMAD6O43541 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.09■□□□□ 0.49
SMAD6O43541 REXO1L6P-202ENST00000619970 1078 ntBASIC18.09■□□□□ 0.49
SMAD6O43541 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.09■□□□□ 0.49
SMAD6O43541 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SMAD6O43541 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.09■□□□□ 0.49
SMAD6O43541 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.09■□□□□ 0.49
SMAD6O43541 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD6O43541 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMAD6O43541 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SMAD6O43541 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SMAD6O43541 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMAD6O43541 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.08■□□□□ 0.49
SMAD6O43541 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMAD6O43541 AC138028.4-201ENST00000564984 1845 ntBASIC18.08■□□□□ 0.48
SMAD6O43541 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SMAD6O43541 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.08■□□□□ 0.48
SMAD6O43541 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 AF238378.1-201ENST00000526806 358 ntBASIC18.08■□□□□ 0.48
SMAD6O43541 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
SMAD6O43541 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.08■□□□□ 0.48
SMAD6O43541 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.08■□□□□ 0.48
SMAD6O43541 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SMAD6O43541 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.08■□□□□ 0.48
SMAD6O43541 AL031008.1-201ENST00000619963 541 ntBASIC18.08■□□□□ 0.48
SMAD6O43541 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMAD6O43541 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms