Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RIPK2O43353 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.23■□□□□ 0.51
RIPK2O43353 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RIPK2O43353 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RIPK2O43353 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
RIPK2O43353 REXO1L11P-201ENST00000620964 1927 ntBASIC18.23■□□□□ 0.51
RIPK2O43353 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.22■□□□□ 0.51
RIPK2O43353 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.22■□□□□ 0.51
RIPK2O43353 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 AGGF1P2-201ENST00000426656 2106 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.22■□□□□ 0.51
RIPK2O43353 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.22■□□□□ 0.51
RIPK2O43353 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.22■□□□□ 0.51
RIPK2O43353 AC128676.1-201ENST00000454392 318 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.22■□□□□ 0.51
RIPK2O43353 RPPH1-201ENST00000516869 333 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.22■□□□□ 0.51
RIPK2O43353 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 KRT18P6-201ENST00000555540 1265 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 WWOX-216ENST00000569818 525 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.22■□□□□ 0.51
RIPK2O43353 CD177P1-201ENST00000606252 935 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.22■□□□□ 0.51
RIPK2O43353 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.22■□□□□ 0.51
RIPK2O43353 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RIPK2O43353 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RIPK2O43353 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RIPK2O43353 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RIPK2O43353 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.22■□□□□ 0.51
RIPK2O43353 AC022898.2-201ENST00000616822 1312 ntBASIC18.22■□□□□ 0.51
RIPK2O43353 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.21■□□□□ 0.51
RIPK2O43353 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RIPK2O43353 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RIPK2O43353 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RIPK2O43353 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RIPK2O43353 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.21■□□□□ 0.51
RIPK2O43353 AC090192.1-201ENST00000517740 490 ntBASIC18.21■□□□□ 0.51
RIPK2O43353 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.21■□□□□ 0.51
RIPK2O43353 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.21■□□□□ 0.51
RIPK2O43353 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.21■□□□□ 0.51
RIPK2O43353 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RIPK2O43353 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.21■□□□□ 0.51
RIPK2O43353 LINC01451-201ENST00000623792 534 ntBASIC18.21■□□□□ 0.51
RIPK2O43353 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RIPK2O43353 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RIPK2O43353 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RIPK2O43353 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.2■□□□□ 0.5
RIPK2O43353 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.2■□□□□ 0.5
RIPK2O43353 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RIPK2O43353 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.2■□□□□ 0.5
RIPK2O43353 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.2■□□□□ 0.5
RIPK2O43353 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.2■□□□□ 0.5
RIPK2O43353 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
RIPK2O43353 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.2■□□□□ 0.5
RIPK2O43353 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.2■□□□□ 0.5
RIPK2O43353 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RIPK2O43353 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RIPK2O43353 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RIPK2O43353 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms