Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.22■□□□□ 0.19
SURF4O15260 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SURF4O15260 MMP23A-201ENST00000234610 1017 ntBASIC16.22■□□□□ 0.19
SURF4O15260 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.22■□□□□ 0.19
SURF4O15260 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.22■□□□□ 0.19
SURF4O15260 C2orf69P3-201ENST00000565542 1120 ntBASIC16.22■□□□□ 0.19
SURF4O15260 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 AC010240.3-201ENST00000607688 395 ntBASIC16.22■□□□□ 0.19
SURF4O15260 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.22■□□□□ 0.19
SURF4O15260 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SURF4O15260 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.22■□□□□ 0.19
SURF4O15260 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SURF4O15260 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SURF4O15260 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SURF4O15260 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SURF4O15260 CROCCP2-202ENST00000412962 2773 ntBASIC16.21■□□□□ 0.19
SURF4O15260 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 AC092338.2-201ENST00000568827 1415 ntBASIC16.21■□□□□ 0.19
SURF4O15260 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.21■□□□□ 0.19
SURF4O15260 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.21■□□□□ 0.19
SURF4O15260 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.21■□□□□ 0.19
SURF4O15260 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.21■□□□□ 0.19
SURF4O15260 MIR1238-201ENST00000408483 83 ntBASIC16.21■□□□□ 0.19
SURF4O15260 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.21■□□□□ 0.19
SURF4O15260 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 BX088651.1-201ENST00000540551 451 ntBASIC16.21■□□□□ 0.19
SURF4O15260 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.21■□□□□ 0.19
SURF4O15260 FITM1-202ENST00000559294 800 ntBASIC16.21■□□□□ 0.19
SURF4O15260 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.21■□□□□ 0.19
SURF4O15260 AP000525.1-201ENST00000608286 694 ntBASIC16.21■□□□□ 0.19
SURF4O15260 AC073912.3-201ENST00000624414 853 ntBASIC16.21■□□□□ 0.19
SURF4O15260 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SURF4O15260 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SURF4O15260 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
SURF4O15260 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.21■□□□□ 0.19
SURF4O15260 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SURF4O15260 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.21■□□□□ 0.18
SURF4O15260 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SURF4O15260 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SURF4O15260 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SURF4O15260 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SURF4O15260 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SURF4O15260 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.2■□□□□ 0.18
SURF4O15260 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.2■□□□□ 0.18
SURF4O15260 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.2■□□□□ 0.18
SURF4O15260 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
SURF4O15260 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.2■□□□□ 0.18
SURF4O15260 CCR12P-201ENST00000446203 998 ntBASIC16.2■□□□□ 0.18
SURF4O15260 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.2■□□□□ 0.18
SURF4O15260 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.2■□□□□ 0.18
SURF4O15260 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.2■□□□□ 0.18
SURF4O15260 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
SURF4O15260 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SURF4O15260 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms