Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.05■□□□□ 0.48
NPC1O15118 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.05■□□□□ 0.48
NPC1O15118 OR7E14P-202ENST00000530490 1290 ntBASIC18.05■□□□□ 0.48
NPC1O15118 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.05■□□□□ 0.48
NPC1O15118 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.05■□□□□ 0.48
NPC1O15118 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.05■□□□□ 0.48
NPC1O15118 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.05■□□□□ 0.48
NPC1O15118 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.05■□□□□ 0.48
NPC1O15118 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPC1O15118 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.05■□□□□ 0.48
NPC1O15118 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 PHGDH-209ENST00000641074 1780 ntBASIC18.04■□□□□ 0.48
NPC1O15118 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NPC1O15118 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.04■□□□□ 0.48
NPC1O15118 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.04■□□□□ 0.48
NPC1O15118 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 HNRNPDP1-201ENST00000439535 754 ntBASIC18.04■□□□□ 0.48
NPC1O15118 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.04■□□□□ 0.48
NPC1O15118 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.04■□□□□ 0.48
NPC1O15118 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.04■□□□□ 0.48
NPC1O15118 AC009113.1-201ENST00000570267 2443 ntBASIC18.04■□□□□ 0.48
NPC1O15118 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
NPC1O15118 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
NPC1O15118 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NPC1O15118 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
NPC1O15118 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NPC1O15118 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPC1O15118 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.03■□□□□ 0.48
NPC1O15118 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.03■□□□□ 0.48
NPC1O15118 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NPC1O15118 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.03■□□□□ 0.48
NPC1O15118 RPL13AP23-201ENST00000480739 586 ntBASIC18.03■□□□□ 0.48
NPC1O15118 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 AL671883.3-201ENST00000603274 991 ntBASIC18.03■□□□□ 0.48
NPC1O15118 AC116407.3-201ENST00000623905 1129 ntBASIC18.03■□□□□ 0.48
NPC1O15118 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.03■□□□□ 0.48
NPC1O15118 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.03■□□□□ 0.48
NPC1O15118 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.03■□□□□ 0.48
NPC1O15118 AC104581.1-202ENST00000635932 2618 ntBASIC18.03■□□□□ 0.48
NPC1O15118 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.03■□□□□ 0.48
NPC1O15118 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPC1O15118 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms