Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.81■□□□□ 0.28
AP3D1O14617 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP3D1O14617 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
AP3D1O14617 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.81■□□□□ 0.28
AP3D1O14617 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 HMGA1P5-201ENST00000412453 271 ntBASIC16.81■□□□□ 0.28
AP3D1O14617 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.81■□□□□ 0.28
AP3D1O14617 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3D1O14617 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.81■□□□□ 0.28
AP3D1O14617 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP3D1O14617 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
AP3D1O14617 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
AP3D1O14617 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 AC024243.1-201ENST00000609234 778 ntBASIC16.8■□□□□ 0.28
AP3D1O14617 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3D1O14617 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3D1O14617 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
AP3D1O14617 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3D1O14617 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3D1O14617 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3D1O14617 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 KRT18P22-201ENST00000402024 1347 ntBASIC16.79■□□□□ 0.28
AP3D1O14617 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3D1O14617 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3D1O14617 AC104390.1-201ENST00000555663 520 ntBASIC16.79■□□□□ 0.28
AP3D1O14617 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.79■□□□□ 0.28
AP3D1O14617 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3D1O14617 AC145285.6-201ENST00000604632 637 ntBASIC16.79■□□□□ 0.28
AP3D1O14617 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms