Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC097488.1-201ENST00000507834 756 ntBASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 CD177P1-201ENST00000606252 935 ntBASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV5A0A0B4J249 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV5A0A0B4J249 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV5A0A0B4J249 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
TRAV5A0A0B4J249 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AL024508.2-201ENST00000607749 1894 ntBASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ID1-201ENST00000376105 1233 ntBASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms