Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 METTL21AP1-201ENST00000438852 635 ntBASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 AC254562.1-201ENST00000417586 456 ntBASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN10AQ9Y5Y9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 AC100803.2-201ENST00000562459 1963 ntBASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN10AQ9Y5Y9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 RPS15P9-201ENST00000494093 319 ntBASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 AC109462.3-201ENST00000573934 613 ntBASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SCN10AQ9Y5Y9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 AC018445.3-201ENST00000624177 1945 ntBASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 BX276092.7-203ENST00000637198 1536 ntBASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN10AQ9Y5Y9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AC003669.1-201ENST00000334569 611 ntBASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 DDX43P3-201ENST00000441064 443 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms