Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 AP000593.1-201ENST00000393668 712 ntBASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 AC060766.1-201ENST00000590824 627 ntBASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA4Q9Y5G9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA4Q9Y5G9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 KRT8P50-201ENST00000562022 1438 ntBASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 FAAHP1-202ENST00000446499 1238 ntBASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AC011498.5-201ENST00000592027 486 ntBASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AL121672.3-201ENST00000608644 468 ntBASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 AL138781.2-201ENST00000617896 1843 ntBASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA4Q9Y5G9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PVRIG2P-201ENST00000435460 978 ntBASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 BX276092.5-203ENST00000456199 560 ntBASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms