Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 AC138932.1-201ENST00000534164 6830 ntBASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA9Q9Y5G4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 MIR149-201ENST00000384879 89 ntBASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 RBM17P3-201ENST00000417687 1192 ntBASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 AC132008.2-207ENST00000454517 770 ntBASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 AC018712.1-201ENST00000455767 687 ntBASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 AL355877.3-201ENST00000622820 899 ntBASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA9Q9Y5G4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 AC020916.1-201ENST00000587762 1774 ntBASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA9Q9Y5G4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 AP000997.3-201ENST00000623333 2250 ntBASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms