Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 PGM5P2-202ENST00000637225 1043 ntBASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LEMD3Q9Y2U8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 AC073621.1-201ENST00000392730 636 ntBASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 AC009947.1-201ENST00000444350 727 ntBASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 AL049757.1-201ENST00000616842 1596 ntBASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LEMD3Q9Y2U8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 AL020989.1-201ENST00000422979 469 ntBASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 MIR1199-201ENST00000621445 119 ntBASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 AL096828.2-201ENST00000567259 1965 ntBASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LEMD3Q9Y2U8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 AL589182.2-201ENST00000619332 1049 ntBASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LEMD3Q9Y2U8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms