Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 SDHAP2-201ENST00000455183 2001 ntBASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 SLC29A4P1-201ENST00000398760 971 ntBASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 UNC93B4-201ENST00000505679 747 ntBASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 MIR564-202ENST00000385049 94 ntBASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 AC026271.2-201ENST00000428091 497 ntBASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 AC091390.4-202ENST00000476426 537 ntBASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 AC131212.4-201ENST00000623606 975 ntBASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.71□□□□□ -0.05
RCL1Q9Y2P8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 AC133963.1-201ENST00000504166 1679 ntBASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
RCL1Q9Y2P8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 AC004980.1-204ENST00000429707 299 ntBASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RCL1Q9Y2P8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms