Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 IGHGP-201ENST00000390555 1178 ntBASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 AL121672.3-201ENST00000608644 468 ntBASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 AC004263.2-201ENST00000617183 678 ntBASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 KRT8P26-201ENST00000534154 1276 ntBASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 AL390719.2-201ENST00000606993 987 ntBASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 OR6D1P-202ENST00000641007 5290 ntBASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPH3AQ9Y2J0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 TSSC2-201ENST00000450217 709 ntBASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AC008687.5-201ENST00000593746 558 ntBASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AL353692.3-201ENST00000407031 1396 ntBASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 AC016734.2-201ENST00000624325 1377 ntBASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 LINC00602-201ENST00000629776 2065 ntBASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms