Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
COMMD3Q9UBI1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COMMD3Q9UBI1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.83■□□□□ 0.13
COMMD3Q9UBI1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 Z85996.1-201ENST00000494644 937 ntBASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 PRSS44-201ENST00000515154 1146 ntBASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 AC133963.1-201ENST00000504166 1679 ntBASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COMMD3Q9UBI1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 AGGF1P2-201ENST00000426656 2106 ntBASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.82■□□□□ 0.12
COMMD3Q9UBI1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 KRT18P5-201ENST00000436075 1291 ntBASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms