Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 AC100803.2-201ENST00000562459 1963 ntBASIC16.24■□□□□ 0.19
HINT3Q9NQE9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 AC009065.1-201ENST00000564055 1225 ntBASIC16.24■□□□□ 0.19
HINT3Q9NQE9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HINT3Q9NQE9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 TSPY17P-201ENST00000450329 467 ntBASIC16.23■□□□□ 0.19
HINT3Q9NQE9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 DUTP2-201ENST00000519164 463 ntBASIC16.23■□□□□ 0.19
HINT3Q9NQE9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 AC104390.1-201ENST00000555663 520 ntBASIC16.23■□□□□ 0.19
HINT3Q9NQE9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HINT3Q9NQE9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 AC132938.6-201ENST00000623828 1655 ntBASIC16.22■□□□□ 0.19
HINT3Q9NQE9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 AL353719.1-201ENST00000566847 864 ntBASIC16.22■□□□□ 0.19
HINT3Q9NQE9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms