Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 AL049757.1-201ENST00000616842 1596 ntBASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH11XQ9BZA7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 CRYGEP-201ENST00000412192 528 ntBASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 KLF4P1-201ENST00000412782 1185 ntBASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 AC005829.1-201ENST00000570002 483 ntBASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 MIR4751-201ENST00000578027 74 ntBASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH11XQ9BZA7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDH11XQ9BZA7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 IGHV3-65-201ENST00000523210 341 ntBASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 AC008667.4-201ENST00000607370 168 ntBASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH11XQ9BZA7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 AC003669.1-201ENST00000334569 611 ntBASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms