Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NPAS1Q99742 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS1Q99742 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS1Q99742 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
NPAS1Q99742 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.37■□□□□ 0.21
NPAS1Q99742 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS1Q99742 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NPAS1Q99742 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS1Q99742 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPAS1Q99742 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NPAS1Q99742 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS1Q99742 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS1Q99742 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPAS1Q99742 AC100803.2-201ENST00000562459 1963 ntBASIC16.37■□□□□ 0.21
NPAS1Q99742 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NPAS1Q99742 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 AP002383.4-201ENST00000442518 975 ntBASIC16.36■□□□□ 0.21
NPAS1Q99742 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS1Q99742 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS1Q99742 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS1Q99742 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS1Q99742 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS1Q99742 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS1Q99742 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPAS1Q99742 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS1Q99742 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS1Q99742 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPAS1Q99742 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPAS1Q99742 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS1Q99742 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS1Q99742 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS1Q99742 KRT8P26-201ENST00000534154 1276 ntBASIC16.35■□□□□ 0.21
NPAS1Q99742 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS1Q99742 AC091076.1-201ENST00000610741 619 ntBASIC16.35■□□□□ 0.21
NPAS1Q99742 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS1Q99742 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS1Q99742 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS1Q99742 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms