Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 AC064862.7-201ENST00000604520 867 ntBASIC17.39■□□□□ 0.37
SLC38A3Q99624 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 AC079776.4-201ENST00000511039 504 ntBASIC17.38■□□□□ 0.37
SLC38A3Q99624 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC38A3Q99624 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC38A3Q99624 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 AC008608.2-201ENST00000606089 416 ntBASIC17.37■□□□□ 0.37
SLC38A3Q99624 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A3Q99624 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC38A3Q99624 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
SLC38A3Q99624 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 AC098818.2-201ENST00000564925 2320 ntBASIC17.36■□□□□ 0.37
SLC38A3Q99624 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A3Q99624 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 AC106795.1-205ENST00000512851 1056 ntBASIC17.36■□□□□ 0.37
SLC38A3Q99624 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 SLC25A6P4-201ENST00000586535 553 ntBASIC17.36■□□□□ 0.37
SLC38A3Q99624 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 AC011467.2-201ENST00000598425 242 ntBASIC17.36■□□□□ 0.37
SLC38A3Q99624 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC38A3Q99624 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms