Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 AC009949.1-201ENST00000623048 1830 ntBASIC17.51■□□□□ 0.39
SORT1Q99523 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 AC022898.2-201ENST00000616822 1312 ntBASIC17.51■□□□□ 0.39
SORT1Q99523 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 HTR7P1-202ENST00000624664 4411 ntBASIC17.51■□□□□ 0.39
SORT1Q99523 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.51■□□□□ 0.39
SORT1Q99523 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.51■□□□□ 0.39
SORT1Q99523 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.51■□□□□ 0.39
SORT1Q99523 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.51■□□□□ 0.39
SORT1Q99523 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.51■□□□□ 0.39
SORT1Q99523 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.51■□□□□ 0.39
SORT1Q99523 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.51■□□□□ 0.39
SORT1Q99523 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.51■□□□□ 0.39
SORT1Q99523 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.51■□□□□ 0.39
SORT1Q99523 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORT1Q99523 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SORT1Q99523 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SORT1Q99523 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SORT1Q99523 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.5■□□□□ 0.39
SORT1Q99523 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.5■□□□□ 0.39
SORT1Q99523 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SORT1Q99523 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORT1Q99523 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.5■□□□□ 0.39
SORT1Q99523 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.5■□□□□ 0.39
SORT1Q99523 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.5■□□□□ 0.39
SORT1Q99523 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SORT1Q99523 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.49■□□□□ 0.39
SORT1Q99523 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.49■□□□□ 0.39
SORT1Q99523 AC106886.4-201ENST00000623557 2502 ntBASIC17.49■□□□□ 0.39
SORT1Q99523 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.49■□□□□ 0.39
SORT1Q99523 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SORT1Q99523 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.49■□□□□ 0.39
SORT1Q99523 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.49■□□□□ 0.39
SORT1Q99523 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.49■□□□□ 0.39
SORT1Q99523 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 SEC1P-202ENST00000473944 940 ntBASIC17.49■□□□□ 0.39
SORT1Q99523 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
SORT1Q99523 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.49■□□□□ 0.39
SORT1Q99523 LINC01451-201ENST00000623792 534 ntBASIC17.49■□□□□ 0.39
SORT1Q99523 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SORT1Q99523 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.49■□□□□ 0.39
SORT1Q99523 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.49■□□□□ 0.39
SORT1Q99523 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SORT1Q99523 AGGF1P2-201ENST00000426656 2106 ntBASIC17.48■□□□□ 0.39
SORT1Q99523 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SORT1Q99523 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SORT1Q99523 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SORT1Q99523 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SORT1Q99523 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SORT1Q99523 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SORT1Q99523 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.48■□□□□ 0.39
SORT1Q99523 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms