Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AC002347.1-201ENST00000569543 541 ntBASIC19.01■□□□□ 0.63
ZNF558Q96NG5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AC073592.5-201ENST00000624854 528 ntBASIC19.01■□□□□ 0.63
ZNF558Q96NG5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 AC004817.3-201ENST00000602957 2129 ntBASIC19.01■□□□□ 0.63
ZNF558Q96NG5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF558Q96NG5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19■□□□□ 0.63
ZNF558Q96NG5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19■□□□□ 0.63
ZNF558Q96NG5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19■□□□□ 0.63
ZNF558Q96NG5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19■□□□□ 0.63
ZNF558Q96NG5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19■□□□□ 0.63
ZNF558Q96NG5 AC112482.1-201ENST00000492080 688 ntBASIC19■□□□□ 0.63
ZNF558Q96NG5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 AL031598.1-201ENST00000561511 1773 ntBASIC19■□□□□ 0.63
ZNF558Q96NG5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19■□□□□ 0.63
ZNF558Q96NG5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF558Q96NG5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19■□□□□ 0.63
ZNF558Q96NG5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 PHGDH-209ENST00000641074 1780 ntBASIC18.99■□□□□ 0.63
ZNF558Q96NG5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 COX5BP2-201ENST00000392354 334 ntBASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AC073621.1-201ENST00000392730 636 ntBASIC18.99■□□□□ 0.63
ZNF558Q96NG5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AC004832.2-201ENST00000426397 482 ntBASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AC136632.2-201ENST00000512891 861 ntBASIC18.99■□□□□ 0.63
ZNF558Q96NG5 DUTP2-201ENST00000519164 463 ntBASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF558Q96NG5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms