Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 PVRIG2P-201ENST00000435460 978 ntBASIC13.03□□□□□ -0.32
C9orf85Q96MD7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 SNORA78-201ENST00000459373 127 ntBASIC13.03□□□□□ -0.32
C9orf85Q96MD7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C9orf85Q96MD7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 LINC00304-203ENST00000565008 1864 ntBASIC13.02□□□□□ -0.32
C9orf85Q96MD7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.02□□□□□ -0.32
C9orf85Q96MD7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 AC113404.2-201ENST00000507884 177 ntBASIC13.02□□□□□ -0.33
C9orf85Q96MD7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 AC116407.2-201ENST00000613639 860 ntBASIC13.02□□□□□ -0.33
C9orf85Q96MD7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
C9orf85Q96MD7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms